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Imaging technologies for plant high-throughput phenotyping: a review

Yong ZHANG, Naiqian ZHANG

Frontiers of Agricultural Science and Engineering 2018, Volume 5, Issue 4,   Pages 406-419 doi: 10.15302/J-FASE-2018242

Abstract:

Phenomics studies a variety of phenotypic plant traits and is the key to understanding genetic functionsrapid development of genomics, many plant phenotyping platforms have been developed to study complex traitshigh-throughput phenotyping, reviews applications of these technologies in detecting and measuring plant morphological, physiological, and pathological traits, and compares their advantages and limitations.

Keywords： high-throughput phenotyping     imaging technology     morphological traits     pathological traits     physiologicaltraits    

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Genomic regions under selection for important traits in domestic horse breeds

Xuexue LIU, Yuehui MA, Lin JIANG

Frontiers of Agricultural Science and Engineering 2017, Volume 4, Issue 3,   Pages 289-294 doi: 10.15302/J-FASE-2017155

Abstract: Therefore, identification of genetic markers underlying the traits of interest in domestic horses is

Keywords： horse     coat color     racing performance     gait     height    

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Recent advances in understanding genetic variants associated with economically important traits in sheep

Song-Song XU, Meng-Hua LI

Frontiers of Agricultural Science and Engineering 2017, Volume 4, Issue 3,   Pages 279-288 doi: 10.15302/J-FASE-2017151

Abstract: However, genetic improvements for the key traits associated with meat, growth, milk, wool, reproductiontechnologies over the last decade, a list of functional genes and genetic variants associated with these traitsThis review covers recent genome-wide studies on sheep productive traits using high-throughput screeningcomprehensive information on functional genes and genetic variants associated with economically important traits

Keywords： sheep     high-throughput screening     productive traits     genome-wide studies    

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Numerical simulations of morphological changes in barrier islands induced by storm surges and waves using

Soumendra Nath KUIRY, Yan DING, Sam S Y WANG

Frontiers of Structural and Civil Engineering 2014, Volume 8, Issue 1,   Pages 57-68 doi: 10.1007/s11709-014-0235-0

Abstract: finite volume flow model in two-dimensions is presented for simulating supercritical coastal flows and morphologicalsimulating flows induced by extreme conditions such as waves, surge tides, river flood flows, etc., and morphologicalisland breaching, overflow and overwash due to severe storm attack are simulated and the predicted morphological

Keywords： coastal inlet     coastal process modeling     supercritical flow     sediment transport     barrier islands    

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Effects of previous drying of sediment on root functional traits and rhizoperformance of emerged macrophytes

Frontiers of Environmental Science & Engineering 2021, Volume 15, Issue 6, doi: 10.1007/s11783-021-1427-1

Abstract:

• Sediment desiccation alters morphological characteristics of aquatic

Keywords： Fibrous-root macrophytes     Thick-root macrophytes     Nutrients removal     Wet sediment     Dried-rewetted sediment    

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A genome-wide association study of five meat quality traits in Yorkshire pigs

Qian DONG,Huiying LIU,Xinyun LI,Wei WEI,Shuhong ZHAO,Jianhua CAO

Frontiers of Agricultural Science and Engineering 2014, Volume 1, Issue 2,   Pages 137-143 doi: 10.15302/J-FASE-2014014

Abstract: To identify genomic regions and haplotype blocks responsible for meat quality traits in pigs, a genome-wideassociation study was conducted for five traits including intramuscular fat content, pH at 45 min andtotal of 344 single nucleotide polymorphisms (SNP) were significantly associated with five meat quality traitsaddition, 25 haplotype blocks based on 116 SNPs were revealed with SNP combination patterns for five traitsOur study added new SNP information for identification of meat quality traits in pigs and will help elucidate

Keywords： Pig     GWAS     meat quality trait     SNP    

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BULKED SEGREGANT RNA SEQUENCING (BSR-SEQ) IDENTIFIES A NOVEL ALLELE ASSOCIATED WITH WEEPING TRAITS IN

Frontiers of Agricultural Science and Engineering 2021, Volume 8, Issue 2,

Abstract: However, exploration of casual genes controlling weeping traits is rather limited.variation in the Pm024074 gene, providing precise marker-assisted breeding for weeping traits

Keywords： BSR-seq / PmUGT72B3 / Prunus mume / UDP-glycosyltransferase / weeping shoots / WGCNA    

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Current techniques for assessing developmental neurotoxicity of pesticides

GAO Yu, TIAN Ying, SHEN Xiaoming

Frontiers of Medicine 2008, Volume 2, Issue 4,   Pages 337-343 doi: 10.1007/s11684-008-0064-4

Abstract: Non-mammalian models (sea urchins, zebrafish and other non-mammalian models); and (3) mammalian models (morphological

Keywords： paradigms     Pyrethroids     non-mammalian     susceptible     morphological    

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BULKED SEGREGANT RNA SEQUENCING (BSR-SEQ) IDENTIFIES A NOVEL ALLELE ASSOCIATED WITH WEEPING TRAITS IN

Xiaokang ZHUO, Tangchun ZHENG, Zhiyong ZHANG, Suzhen LI, Yichi ZHANG, Lidan SUN, Weiru YANG, Jia WANG, Tangren CHENG, Qixiang ZHANG

Frontiers of Agricultural Science and Engineering   Pages 196-214 doi: 10.15302/J-FASE-2020379

Abstract: However, exploration of casual genes controlling weeping traits is rather limited.developed based on the variation in the gene, providing precise marker-assisted breeding for weeping traits

Keywords： BSR-seq     PmUGT72B3     Prunus mume     UDP-glycosyltransferase     weeping shoots     WGCNA    

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Plant Traits for Phytoremediation in the Tropics Article

Xiangting Cleo Chen, Liling Huang, Tze Hsien Agnes Chang, Bee Lian Ong, Say Leong Ong, Jiangyong Hu

Engineering 2019, Volume 5, Issue 5,   Pages 841-848 doi: 10.1016/j.eng.2019.07.019

Abstract: This paper discusses plant traits that can enhance the phytoremediation of nutrient pollutants in stormwater

Keywords： Nitrogen     Phosphorus     Plant traits     Bioretention system     Stormwater     Tropical plant     Nutrient pollutant    

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Bidirectional Causality Between Immunoglobulin G N-Glycosylation and Metabolic Traits: A Mendelian Randomization Article

Xiaoni Meng, Weijie Cao, Di Liu, Isinta Maranga Elijah, Weijia Xing, Haifeng Hou, Xizhu Xu, Manshu Song, Youxin Wang

Engineering 2023, Volume 26, Issue 7,   Pages 74-88 doi: 10.1016/j.eng.2022.11.004

Abstract: Bidirectional causalityAlthough the association between immunoglobulin G (IgG) N-glycosylation and metabolic traitsdata in order to investigate the bidirectional causal association of IgG Nglycosylation with metabolic traits)) genetically determined IgG N-glycans were identified as being associated with metabolic traitsstudies, respectively, by integrating IgG N-glycan-QTL variants with GWAS results for metabolic traitsMR analysis of the integrated metabolic-QTL variants with the GWAS results for IgG N-glycosylation traits

Keywords： Mendelian randomization study     Immunoglobulin G     N-glycosylation     Metabolic traits     Quantitative trait    

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impacts on sludge fermentation: Focusing on the particular metabolic processes and microbial genetic traits

Frontiers of Environmental Science & Engineering 2022, Volume 16, Issue 8, doi: 10.1007/s11783-022-1527-6

Abstract:

• The promoting effects for VFA generation follow the order of APG>SDBS>HTAB.

Keywords： Waste activated sludge (WAS)     Volatile fatty acids (VFA)     Surfactant types     Functional microorganisms     Metabolic activity upregulation    

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A Flexible Moving Objects Segmentation Method

Zhao Yanling,Zhang Zhichao,Gao Zhenming,Zhang Qingchao

Strategic Study of CAE 2006, Volume 8, Issue 5,   Pages 84-87

Abstract:

The segmentation for moving pictures is important in content-based video encoding and video retrieval. The method of moving object segmentation is proposed with spatio-temporal threshold information. The method does well in functional agility. Its alterability depends on real conditions. The experiments show that the method can get a better result with less runtime.

Keywords： spatio-temporal     moving regions     moving objects     morphological gradient operator     flexibility    

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Morphological and mechanical characterization of a PMMA/CdS nanocomposite

Vishal MATHUR, Manasvi DIXIT, K.S. RATHORE, N. S. SAXENA, K.B. SHARMA

Frontiers of Chemical Science and Engineering 2011, Volume 5, Issue 2,   Pages 258-263 doi: 10.1007/s11705-010-1014-7

Abstract: The surface morphological characterization of the PMMA/CdS nanocomposite has been done through scanning

Keywords： poly(methyl methacrylate) (PMMA)     filler nanoparticles     polymer semiconducting nanocomposite     tensile properties     glass transition temperature    

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Simulation study of shock wave reaction on porous materia

Xu Aiguo,Zhang Guangcai,Yu Xijun,Pan Xiaofei,Zhu Jianshi

Strategic Study of CAE 2009, Volume 11, Issue 9,   Pages 13-19

Abstract:

Complex spatial-temporal dissipative structures occur in shocked porous material. The system is globally in nonequilibrium. Both the simulation and data analysis for such a system are challenging.The system was simulated by using the material-point method which was developed recently. The Minkowski functionals were introduced to describe the Turing pattern of the map of state variable like temperature.The relevance among the three Minkowski functionals,the area fraction of the high-temperature regions and the distribution of "hot-spots"  in space was pointed out.The shock wave reaction with inhomogeneous material was studied by analyzing the evolution of Minkowski functionals. The effects of porosity and shock-wave-strength were investigated.

Keywords： shock wave     porous material     material-point-method     morphological characterization    

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Title Author Date Type Operation

Imaging technologies for plant high-throughput phenotyping: a review

Yong ZHANG, Naiqian ZHANG

Journal Article

Genomic regions under selection for important traits in domestic horse breeds

Xuexue LIU, Yuehui MA, Lin JIANG

Journal Article

Recent advances in understanding genetic variants associated with economically important traits in sheep

Song-Song XU, Meng-Hua LI

Journal Article

Numerical simulations of morphological changes in barrier islands induced by storm surges and waves using

Soumendra Nath KUIRY, Yan DING, Sam S Y WANG

Journal Article

Effects of previous drying of sediment on root functional traits and rhizoperformance of emerged macrophytes

Journal Article

A genome-wide association study of five meat quality traits in Yorkshire pigs

Qian DONG,Huiying LIU,Xinyun LI,Wei WEI,Shuhong ZHAO,Jianhua CAO

Journal Article

BULKED SEGREGANT RNA SEQUENCING (BSR-SEQ) IDENTIFIES A NOVEL ALLELE ASSOCIATED WITH WEEPING TRAITS IN

Journal Article

Current techniques for assessing developmental neurotoxicity of pesticides

GAO Yu, TIAN Ying, SHEN Xiaoming

Journal Article

BULKED SEGREGANT RNA SEQUENCING (BSR-SEQ) IDENTIFIES A NOVEL ALLELE ASSOCIATED WITH WEEPING TRAITS IN

Xiaokang ZHUO, Tangchun ZHENG, Zhiyong ZHANG, Suzhen LI, Yichi ZHANG, Lidan SUN, Weiru YANG, Jia WANG, Tangren CHENG, Qixiang ZHANG

Journal Article

Plant Traits for Phytoremediation in the Tropics

Xiangting Cleo Chen, Liling Huang, Tze Hsien Agnes Chang, Bee Lian Ong, Say Leong Ong, Jiangyong Hu

Journal Article

Bidirectional Causality Between Immunoglobulin G N-Glycosylation and Metabolic Traits: A Mendelian Randomization

Xiaoni Meng, Weijie Cao, Di Liu, Isinta Maranga Elijah, Weijia Xing, Haifeng Hou, Xizhu Xu, Manshu Song, Youxin Wang

Journal Article

impacts on sludge fermentation: Focusing on the particular metabolic processes and microbial genetic traits

Journal Article

A Flexible Moving Objects Segmentation Method

Zhao Yanling,Zhang Zhichao,Gao Zhenming,Zhang Qingchao

Journal Article

Morphological and mechanical characterization of a PMMA/CdS nanocomposite

Vishal MATHUR, Manasvi DIXIT, K.S. RATHORE, N. S. SAXENA, K.B. SHARMA

Journal Article

Simulation study of shock wave reaction on porous materia

Xu Aiguo,Zhang Guangcai,Yu Xijun,Pan Xiaofei,Zhu Jianshi

Journal Article